Chum and pink salmon genetics - Genetic and life history variation of southern chum and pink salmon
Data Set (DS) | Northwest Fisheries Science Center (NWFSC)GUID: gov.noaa.nmfs.inport:20586 | Updated: August 9, 2022 | Published / External
Summary
Short Citation
Northwest Fisheries Science Center, 2024: Chum and pink salmon genetics - Genetic and life history variation of southern chum and pink salmon, https://www.fisheries.noaa.gov/inport/item/20586.
Full Citation Examples
The distribution of genetic and life history variation in chum (Oncorhynchus keta) and pink (O. gorbuscha) salmon in their southern range in North America is key to understanding the factors that limit their distribution and abundance there. These species have the widest natural spawning distributions for salmon across the Pacific rim, and both species are abundant north of the contiguous 48 United States. However, they become less plentiful and persistent south of Puget Sound. Chum salmon are documented to spawn as far south in North America as San Lorenzo River in California and 322 km upstream in the Sacramento River. At the turn of the 20th century chum salmon was the most abundant salmonid in streams between the Sacramento and Columbia rivers, and over a million chum salmon returned to the Columbia River as late as the 1950s, supporting a thriving commercial fishery in Tillamook Bay, Oregon. Pink salmon are less plentiful in the region but considerable numbers have run into the lower Columbia River in past decades, and they are occasionally observed in small numbers in the Trinity River, California. Currently, chum and pink salmon populations south of the Columbia River have all but vanished, and Columbia River chum salmon are now listed under the ESA as a threatened species. The demographics, genetics, and life history of these southern populations has not been well documented; this project is an attempt to collect available information on them.
Tissues collected from Washington and Oregon adult spawners and carcasses between 2009 and present for DNA extraction.
Distribution Information
-
Time series of adult chum salmon mean size at age.
-
Time series of adult chum salmon mean size at age.
NA
Child Items
Type | Title |
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Entity | Oregon Chum Salmon Size at Age and Environmental Indicators |
Contact Information
Point of Contact
Jeff Hard
Jeff.Hard@noaa.gov
206-860-3275
Metadata Contact
Northwest Fisheries Science Center (NWFSC)
nmfs.nwfsc.metadata@noaa.gov
206-860-3200
NWFSC Home
Extents
-122.3062° W,
-122.3062° E,
47.6449° N,
47.6449° S
NWFSC Montlake: Northwest Fisheries Science Center, Seattle, WA USA
2011-10-01 - Present
Item Identification
Title: | Chum and pink salmon genetics - Genetic and life history variation of southern chum and pink salmon |
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Short Name: | Chum and pink salmon genetics (Genetic and life history variation of southern chum and pink salmon) |
Status: | In Work |
Creation Date: | 2013-08-04 |
Publication Date: | 2017-02-07 |
Abstract: |
The distribution of genetic and life history variation in chum (Oncorhynchus keta) and pink (O. gorbuscha) salmon in their southern range in North America is key to understanding the factors that limit their distribution and abundance there. These species have the widest natural spawning distributions for salmon across the Pacific rim, and both species are abundant north of the contiguous 48 United States. However, they become less plentiful and persistent south of Puget Sound. Chum salmon are documented to spawn as far south in North America as San Lorenzo River in California and 322 km upstream in the Sacramento River. At the turn of the 20th century chum salmon was the most abundant salmonid in streams between the Sacramento and Columbia rivers, and over a million chum salmon returned to the Columbia River as late as the 1950s, supporting a thriving commercial fishery in Tillamook Bay, Oregon. Pink salmon are less plentiful in the region but considerable numbers have run into the lower Columbia River in past decades, and they are occasionally observed in small numbers in the Trinity River, California. Currently, chum and pink salmon populations south of the Columbia River have all but vanished, and Columbia River chum salmon are now listed under the ESA as a threatened species. The demographics, genetics, and life history of these southern populations has not been well documented; this project is an attempt to collect available information on them. Tissues collected from Washington and Oregon adult spawners and carcasses between 2009 and present for DNA extraction. |
Purpose: |
Raw/field data, Monitoring or sensor data, Laboratory data |
Notes: |
Loaded by FGDC Metadata Uploader, batch 4710, 09-09-2013 13:48 |
Supplemental Information: |
Subject to Public Access to Research Results (PARR): Yes |
Keywords
Theme Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | genetics |
None | life history |
Spatial Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | NWFSC Montlake |
Instrument Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | DNA Sequencer |
Physical Location
Organization: | Northwest Fisheries Science Center |
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City: | Seattle |
State/Province: | WA |
Country: | USA |
Data Set Information
Data Set Scope Code: | Data Set |
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Data Set Type: | Spreadsheet |
Data Presentation Form: | Table (digital) |
Support Roles
Data Steward
Date Effective From: | 2015-10-01 |
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Date Effective To: | |
Contact (Person): | Hard, Jeff |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
Email Address: | Jeff.Hard@noaa.gov |
Phone: | 206-860-3275 |
Distributor
Date Effective From: | 2015-10-01 |
---|---|
Date Effective To: | |
Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
Email Address: | nmfs.nwfsc.metadata@noaa.gov |
Phone: | 206-860-3200 |
URL: | NWFSC Home |
Metadata Contact
Date Effective From: | 2015-10-01 |
---|---|
Date Effective To: | |
Contact (Organization): | Northwest Fisheries Science Center (NWFSC) |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 USA |
Email Address: | nmfs.nwfsc.metadata@noaa.gov |
Phone: | 206-860-3200 |
URL: | NWFSC Home |
Originator
Date Effective From: | 2015-10-01 |
---|---|
Date Effective To: | |
Contact (Person): | Hard, Jeff |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
Email Address: | Jeff.Hard@noaa.gov |
Phone: | 206-860-3275 |
Point of Contact
Date Effective From: | 2015-10-01 |
---|---|
Date Effective To: | |
Contact (Person): | Hard, Jeff |
Address: |
2725 Montlake Boulevard East Seattle, WA 98112 |
Email Address: | Jeff.Hard@noaa.gov |
Phone: | 206-860-3275 |
Extents
Extent Group 1
Extent Group 1 / Geographic Area 1
W° Bound: | -122.3062 | |
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E° Bound: | -122.3062 | |
N° Bound: | 47.6449 | |
S° Bound: | 47.6449 | |
Description |
NWFSC Montlake: Northwest Fisheries Science Center, Seattle, WA USA |
Extent Group 1 / Time Frame 1
Time Frame Type: | Continuing |
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Start: | 2011-10-01 |
Access Information
Security Class: | Unclassified |
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Data Access Procedure: |
At this time, contact the Data Manager for information on obtaining access to this data set. In the near future, the NWFSC will strive to provide all non-sensitive data resources as a web service in order to meet the NOAA Data Access Policy Directive (https://nosc.noaa.gov/EDMC/PD.DA.php). |
Data Access Constraints: |
NA |
Distribution Information
Distribution 1
Start Date: | 2017-02-07 |
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End Date: | Present |
Download URL: | https://www.webapps.nwfsc.noaa.gov/apex/parr/oregon_chum_salmon_size_at_age_and_environmental_indicators/data/page/ |
Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
File Name: | Oregon Chum Salmon Size at Age and Environmental I |
Description: |
Time series of adult chum salmon mean size at age. |
Distribution 2
Start Date: | 2017-02-07 |
---|---|
End Date: | Present |
Download URL: | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/oregon_chum_salmon_size_at_age_and_environmental_indicators |
Distributor: | Northwest Fisheries Science Center (NWFSC) (2015-10-01 - Present) |
File Name: | Oregon Chum Salmon Size at Age and Environmental I |
Description: |
Time series of adult chum salmon mean size at age. |
URLs
URL 1
URL: | https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/10970 |
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Name: | Chum and pink salmon genetics |
URL Type: |
Online Resource
|
File Resource Format: | Web site |
Description: |
NWFSC Dataset Information page. Tissues collected from Washington and Oregon adult spawners and carcasses between 2009 and present for DNA extraction |
Technical Environment
Description: |
Spreadsheet |
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Data Quality
Accuracy: |
High |
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Quality Control Procedures Employed: |
These data were collected and processed in accordance with established protocols and best practices under the direction of the project’s Principal Investigator. Contact the dataset Data Manager in section 3 for full QA/QC methodology. |
Data Management
Have Resources for Management of these Data Been Identified?: | No |
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Approximate Percentage of Budget for these Data Devoted to Data Management: | 1 |
Do these Data Comply with the Data Access Directive?: | No |
Is Access to the Data Limited Based on an Approved Waiver?: | No |
If Distributor (Data Hosting Service) is Needed, Please Indicate: | No |
Approximate Delay Between Data Collection and Dissemination: | 0 days |
If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed: |
No Delay |
Actual or Planned Long-Term Data Archive Location: | NCEI-MD |
Approximate Delay Between Data Collection and Archiving: | 90 |
How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?: |
The Northwest Fisheries Science Center facilitates backup and recovery of all data and IT components which are managed by IT Operations through the capture of static (point-in-time) backup data to physical media. Once data is captured to physical media (every 1-3 days), a duplicate is made and routinely (weekly) transported to an offsite archive facility where it is maintained throughout the data's applicable life-cycle. |
Lineage
Lineage Statement: |
Allele frequency data generated from DNA sequence |
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Child Items
Rubric scores updated every 15m
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Type | Title |
---|---|---|
Entity | Oregon Chum Salmon Size at Age and Environmental Indicators |
Catalog Details
Catalog Item ID: | 20586 |
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GUID: | gov.noaa.nmfs.inport:20586 |
Metadata Record Created By: | Robert Marsicek |
Metadata Record Created: | 2013-09-09 13:48+0000 |
Metadata Record Last Modified By: | SysAdmin InPortAdmin |
Metadata Record Last Modified: | 2022-08-09 17:11+0000 |
Metadata Record Published: | 2019-06-04 |
Owner Org: | NWFSC |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2019-06-04 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2020-06-04 |