Data from "Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus."
Data Set (DS) | Alaska Fisheries Science Center (AFSC)GUID: gov.noaa.nmfs.inport:29818 | Updated: January 15, 2024 | Published / External
Item Identification
| Title: | Data from "Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus." |
|---|---|
| Short Name: | AFSC/NMML: Steller sea lion genetic data |
| Status: | Completed |
| Publication Date: | 2014-10-03 |
| Abstract: |
Data sets used to support analysis published by O'Corry-Crowe et al (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. Data include Steller sea lion genetic data obtained from samples collected from pups on natal rookeries. The genetic data are genotypes at 16 microsatellite loci and haplotypes at mtDNA, spatial data, and allelic and haplotypic frequencies. |
| Purpose: |
These data were collected to investigate Steller sea lion population structure and dispersion. |
| Other Citation Details: |
When using these data, cite the original publication: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944. Also cite the Dryad data package: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52 |
Keywords
Theme Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| None | colonization |
| None | density dependence |
| None | Eumetopias jubatus |
| None | microsatellites |
| None | mixed-stock |
| None | Steller sea lion |
Spatial Keywords
| Thesaurus | Keyword |
|---|---|
| UNCONTROLLED | |
| None | Alaska |
| None | Aleutian Islands |
| None | Bering Sea |
| None | Gulf of Alaska |
| None | Southeast Alaska |
Physical Location
| Organization: | Alaska Fisheries Science Center |
|---|---|
| City: | Seattle |
| State/Province: | WA |
| Country: | USA |
Data Set Information
| Data Set Scope Code: | Data Set |
|---|---|
| Data Set Type: | Files (Word, Excel, PDF, etc.) |
| Maintenance Frequency: | None Planned |
| Data Presentation Form: | Table (digital) |
| Entity Attribute Overview: |
Data deposited at Dryad include MS Excel spreadsheets of genetic data for Steller sea lions; genotypes at 16 microsatellite loci and haplotypes at mtDNA, spatial data, and allelic and haplotypic frequencies. Data archived at GenBank are text files that provide text sequences in FASTA format of all 130 unique Steller sea lion mtDNA haplotypes and lists their GenBank accession numbers. |
| Entity Attribute Detail URL: | http://datadryad.org/handle/10255/dryad.71270 |
| Distribution Liability: |
Applications or inferences derived from the data should be carefully considered for accuracy. While every effort has been made to ensure that these data are accurate and reliable within the limits of the current state of the art, NOAA cannot assume liability for any damages caused by any errors or omissions in the data, nor as a result of the failure of the data to function on a particular system. NOAA makes no warranty, expressed or implied, nor does the fact of distribution constitute such a warranty. |
| Data Set Credit: | When using these data, cite the original publication: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944. Also cite the Dryad data package: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52 |
Support Roles
Data Steward
| Date Effective From: | 2015 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Gelatt, Tom |
| Email Address: | tom.gelatt@noaa.gov |
Distributor
| Date Effective From: | 2014-10-03 |
|---|---|
| Date Effective To: | |
| Contact (Organization): | Alaska Fisheries Science Center (AFSC) |
| Address: |
7600 Sand Point Way N.E., Building 4 Seattle, WA 98115 USA |
| Email Address: | afsc.webmaster@noaa.gov |
| Phone: | (206) 526-4000 |
| Fax: | (206) 526-4004 |
| URL: | https://www.fisheries.noaa.gov/about/alaska-fisheries-science-center |
| Business Hours: | 0700-1700 Pacific Time |
| Contact Instructions: |
Data are available at Dryad and GenBank. See Download section for instructions on how to obtain the data. |
Metadata Contact
| Date Effective From: | 2015-12-15 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Fadely, Brian |
| Address: |
SEATTLE, WA USA |
| Email Address: | brian.fadely@noaa.gov |
| Phone: | 206-526-6173 |
| Fax: | 206-526-6615 |
Point of Contact
| Date Effective From: | 2015-12-15 |
|---|---|
| Date Effective To: | |
| Contact (Person): | Gelatt, Tom |
| Email Address: | tom.gelatt@noaa.gov |
Extents
| Currentness Reference: | Publication Date |
|---|
Extent Group 1
Extent Group 1 / Geographic Area 1
| W° Bound: | 173.355 | |
|---|---|---|
| E° Bound: | -133.527 | |
| N° Bound: | 60.163 | |
| S° Bound: | 51.48 |
Extent Group 1 / Time Frame 1
| Time Frame Type: | Discrete |
|---|---|
| Start: | 2014-10-03 |
| Description: |
Data sets publication date. |
Access Information
| Security Class: | Unclassified |
|---|---|
| Security Classification System: |
None |
| Security Handling Description: |
None |
| Data Access Policy: |
Communication and collaboration with data set authors is strongly encouraged prior to use. |
| Data Access Procedure: |
All 130 unique Steller sea lion mtDNA haplotype sequences have been archived on GenBank with accession numbers KM463123–KM463252. These sequences as well as all microsatellite genotype and mtDNA haplotype frequency data have been archived on the Dryad Digital Repository as data package 10.5061/dryad.g6 h52. |
| Data Access Constraints: |
User must read and fully comprehend the metadata prior to use. Applications or inferences derived from the data should be carefully considered for accuracy. |
| Data Use Constraints: |
User must read and fully comprehend the metadata prior to use. Applications or inferences derived from the data should be carefully considered for accuracy. While every effort has been made to ensure that these data are accurate and reliable within the limits of the current state of the art, NOAA cannot assume liability for any damages caused by any errors or omissions in the data, nor as a result of the failure of the data to function on a particular system. NOAA makes no warranty, expressed or implied, nor does the fact of distribution constitute such a warranty. Communication and collaboration with data set authors is strongly encouraged. When using this data, please cite the original publication: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944 Additionally, please cite the Dryad data package: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52 |
| Metadata Access Constraints: |
None. |
| Metadata Use Constraints: |
Metadata are subject to revision at any time and information within the metadata record should not be cited without author consent. While every effort has been made to ensure that these data are accurate and reliable within the limits of the current state of the art, NOAA cannot assume liability for any damages caused by any errors or omissions in the data, nor as a result of the failure of the data to function on a particular system. NOAA makes no warranty, expressed or implied, nor does the fact of distribution constitute such a warranty. |
Distribution Information
Distribution 1
| Download URL: | http://datadryad.org/bitstream/handle/10255/dryad.71271/GOCC%20-%20Steller%20sea%20lion%20data.xlsx?sequence=1 |
|---|---|
| Distributor: | |
| File Name: | GOCC - Steller sea lion data.xlsx |
| Description: |
Genetic data for Steller sea lions; genotypes at 16 microsatellite loci and haplotypes at mtDNA, spatial data, and allelic and haplotypic frequencies. |
| File Date/Time: | 2014-10-03 00:00:00 |
| File Type (Deprecated): | MS Excel Spreadsheet |
| Distribution Format: | XLS - Microsoft Excel |
| File Size: | 130.1 Kb |
Distribution 2
| Download URL: | http://datadryad.org/bitstream/handle/10255/dryad.71870/GOCC%20-%20stellers%20130%20uni%20haps%20-%20FASTA.txt?sequence=1 |
|---|---|
| Distributor: | |
| File Name: | GOCC - stellers 130 uni haps - FASTA.txt |
| Description: |
Provides text sequences in FASTA format of all 130 unique Steller sea lion mtDNA haplotypes and lists their GenBank accession numbers. |
| File Date/Time: | 2014-10-03 00:00:00 |
| File Size: | 80.62 Kb |
URLs
URL 1
| URL: | http://onlinelibrary.wiley.com/doi/10.1111/mec.12944/full |
|---|---|
| URL Type: |
Online Resource
|
| File Resource Format: | HTML |
| Description: |
Online edition of: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944 |
URL 2
| URL: | http://datadryad.org/handle/10255/dryad.71270 |
|---|---|
| URL Type: |
Online Resource
|
| File Resource Format: | HTML |
| Description: |
Data files location on Dryad. Data can be downloaded from links on this site. |
URL 3
| URL: | https://noaa-fisheries-afsc.data.socrata.com/dataset/Alaska-Steller-sea-lion-genetic-data-of-pups-on-na/x7cd-6ax5 |
|---|---|
| Name: | Alaska Steller sea lion genetic data of pups on natal rookeries |
| URL Type: |
Online Resource
|
| Description: |
NOAA Fisheries Open Data Portal record. |
Technical Environment
| Description: |
Data are stored in MS Excel spreadsheets and text formats. |
|---|
Data Quality
| Representativeness: |
See O'Corry-Crowe et al. 2014. |
|---|---|
| Accuracy: |
See O'Corry-Crowe et al. 2014. |
| Analytical Accuracy: |
See O'Corry-Crowe et al. 2014. |
| Quantitation Limits: |
See O'Corry-Crowe et al. 2014. |
| Bias: |
See O'Corry-Crowe et al. 2014. |
| Comparability: |
See O'Corry-Crowe et al. 2014. |
| Completeness Measure: |
See O'Corry-Crowe et al. 2014. |
| Precision: |
See O'Corry-Crowe et al. 2014. |
| Analytical Precision: |
See O'Corry-Crowe et al. 2014. |
| Field Precision: |
See O'Corry-Crowe et al. 2014. |
| Sensitivity: |
See O'Corry-Crowe et al. 2014. |
| Detection Limit: |
See O'Corry-Crowe et al. 2014. |
| Completeness Report: |
See O'Corry-Crowe et al. 2014. |
| Conceptual Consistency: |
See O'Corry-Crowe et al. 2014. |
| Quality Control Procedures Employed: |
See O'Corry-Crowe et al. 2014. |
Data Management
| Have Resources for Management of these Data Been Identified?: | No |
|---|---|
| Approximate Percentage of Budget for these Data Devoted to Data Management: | 0 |
| Do these Data Comply with the Data Access Directive?: | No |
| Is Access to the Data Limited Based on an Approved Waiver?: | No |
| If Distributor (Data Hosting Service) is Needed, Please Indicate: | Yes |
| Approximate Delay Between Data Collection and Dissemination: | Unknown |
| If Delay is Longer than Latency of Automated Processing, Indicate Under What Authority Data Access is Delayed: |
Data are not automatically processed. |
| Actual or Planned Long-Term Data Archive Location: | Other |
| If World Data Center or Other, Specify: | Dryad |
| Approximate Delay Between Data Collection and Archiving: | Unknown |
| How Will the Data Be Protected from Accidental or Malicious Modification or Deletion Prior to Receipt by the Archive?: |
IT Security and Contingency Plan for the system establishes procedures and applies to the functions, operations, and resources necessary to recover and restore data as hosted in the Western Regional Support Center in Seattle, Washington, following a disruption. |
Lineage
| Lineage Statement: |
See information and lineage descriptions at: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944 and at: O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52 |
|---|
Sources
O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Molecular Ecology 23(22): 5415-5434. http://dx.doi.org/10.1111/mec.12944
| Contact Name: | Molecular Ecology |
|---|---|
| Publish Date: | 2014-10-16 |
| Citation URL: | http://onlinelibrary.wiley.com/doi/10.1111/mec.12944/full |
O’Corry-Crowe G, Gelatt T, Rea L, Bonin C, Rehberg M (2014) Data from: Crossing to safety: Dispersal, colonization and mate choice in evolutionarily distinct populations of Steller sea lions, Eumetopias jubatus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g6h52
| Contact Name: | Dryad |
|---|---|
| Publish Date: | 2014-10-03 |
| Citation URL: | http://datadryad.org/resource/doi:10.5061/dryad.g6h52/2 |
Catalog Details
| Catalog Item ID: | 29818 |
|---|---|
| GUID: | gov.noaa.nmfs.inport:29818 |
| Metadata Record Created By: | Brian Fadely |
| Metadata Record Created: | 2015-12-15 18:08+0000 |
| Metadata Record Last Modified By: | SysAdmin InPortAdmin |
| Metadata Record Last Modified: | 2024-01-15 12:08+0000 |
| Metadata Record Published: | 2018-11-27 |
| Owner Org: | AFSC |
| Metadata Publication Status: | Published Externally |
| Do Not Publish?: | N |
| Metadata Last Review Date: | 2018-11-27 |
| Metadata Review Frequency: | 1 Year |
| Metadata Next Review Date: | 2019-11-27 |