NOAA Point Shapefile- Benthic Habitat Classifications from Phantom S2 ROV Underwater Video, US Virgin Islands, Project NF-06-03, 2006, UTM 20N WGS84
Data Set (DS) | National Centers for Coastal Ocean Science (NCCOS)GUID: gov.noaa.nmfs.inport:38843 | Updated: October 17, 2023 | Published / External
Item Identification
Title: | NOAA Point Shapefile- Benthic Habitat Classifications from Phantom S2 ROV Underwater Video, US Virgin Islands, Project NF-06-03, 2006, UTM 20N WGS84 |
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Short Name: | NF06_USVI_ROV_TransectPoints_metadata |
Status: | Completed |
Publication Date: | 2006-03 |
Abstract: |
This dataset contains a point shapefile with benthic habitat classifications of vertical relief, geomorphological structure, substrate, and biological cover for selected points along various Remotely Operated Vehicle (ROV) underwater video transects in the US Virgin Islands and Puerto Rico. NOAA's NOS/NCCOS/CCMA Biogeography Team, in collaboration with NOAA vessel Nancy Foster and territory, federal, and private sector partners, acquired Remotely Operated Vehicle (ROV) underwater video data offshore of Buck Island, St. Croix, US Virgin Islands and off of LaParguera, Puerto Rico from 3/21/06 to 4/2/06. Data was acquired with a Phantom S2 ROV operated by NOAA's National Undersea Research Program (NURP) and georeferenced and visually interpreted by CCMA employees. Data is in UTM zone 20N, datum WGS84. |
Purpose: |
This ROV video groundtruthing data was collected as IOCM project NF-06-03 during the second year of an ongoing NOAA scientific research mission in the US Virgin Islands to characterize nearshore coral reef habitats. The mission purpose is to better understand the resources within the surveyed reef habitats, and ultimately develop species utilization models linking physical habitats with biological information. The multibeam backscatter, multibeam bathymetry, and ground truth video footage collected during the 2006 mission will be used internally to characterize sea floor topography and to create benthic habitat maps, helping NOAA meet its mapping commitment to the US Coral Reef Task Force. The resulting publicly-distributed data is also a contribution to the greater scientific community interested in the USVI seafloor. |
Notes: |
709 |
Keywords
Theme Keywords
Thesaurus | Keyword |
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ISO 19115 Topic Category |
biota
|
ISO 19115 Topic Category |
environment
|
ISO 19115 Topic Category |
geoscientificInformation
|
ISO 19115 Topic Category |
oceans
|
UNCONTROLLED | |
NOS Data Explorer Topic Category | Bathymetry/Topography |
NOS Data Explorer Topic Category | Environmental Monitoring |
None | Benthic |
None | Biogeography |
None | Biological Cover |
None | BIRNM |
None | Buck |
None | Geomorphological Structure |
None | GIS |
None | Groundtruthing |
None | Habitat |
None | La Parguera |
None | Mapping |
None | Nancy Foster |
None | NF-06-03 |
None | NOAA |
None | NURP |
None | Phantom S2 |
None | Puerto Rico |
None | Remotely Operated Vehicle |
None | ROV |
None | Seafloor |
None | St. Croix |
None | St. Thomas |
None | Substrate |
None | Transect |
None | Underwater Video |
None | US Virgin Islands |
None | USVI |
None | Video |
Temporal Keywords
Thesaurus | Keyword |
---|---|
UNCONTROLLED | |
None | 2006 |
Spatial Keywords
Thesaurus | Keyword |
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UNCONTROLLED | |
None | Buck Island Reef National Monument |
None | VICRNM |
None | Virgin Islands Coral Reef National Monument |
Physical Location
Organization: | National Centers for Coastal Ocean Science |
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City: | Silver Spring |
State/Province: | MD |
Data Set Information
Data Set Scope Code: | Data Set |
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Maintenance Frequency: | As Needed |
Data Presentation Form: | vector digital data |
Distribution Liability: |
These data were prepared by an agency of the United States Government. Neither the United States Government nor any agency thereof, nor any of their employees, make any warranty, expressed or implied, or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed in this report, or represents that its use would not infringe privately owned rights. Reference therein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise does not necessarily constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency thereof. Any views and opinions of authors expressed herein do not necessarily state or reflect those of the United States Government or any agency thereof. Although all data have been used by NOAA, no warranty, expressed or implied, is made by NOAA as to the accuracy of the data and/or related materials. The act of distribution shall not constitute any such warranty, and no responsibility is assumed by NOAA in the use of these data or related materials. |
Data Set Credit: | Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography ProgramDepartment of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Undersea Research Program (NURP)NOAA - NMAO personnel and ship NANCY FOSTER |
Support Roles
Data Steward
Date Effective From: | 2006-03 |
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Date Effective To: | |
Contact (Position): | NCCOS Scientific Data Coordinator |
Email Address: | NCCOS.data@noaa.gov |
Distributor
Date Effective From: | 2006-03 |
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Date Effective To: | |
Contact (Position): | NCCOS Scientific Data Coordinator |
Email Address: | NCCOS.data@noaa.gov |
Metadata Contact
Date Effective From: | 2006-03 |
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Date Effective To: | |
Contact (Position): | NCCOS Scientific Data Coordinator |
Email Address: | NCCOS.data@noaa.gov |
Point of Contact
Date Effective From: | 2006-03 |
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Date Effective To: | |
Contact (Position): | NCCOS Scientific Data Coordinator |
Email Address: | NCCOS.data@noaa.gov |
Principal Investigator
Date Effective From: | 2006-03 |
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Date Effective To: | |
Contact (Person): | Battista, Tim |
Email Address: | tim.battista@noaa.gov |
Extents
Currentness Reference: | Ground Condition |
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Extent Group 1
Extent Group 1 / Geographic Area 1
W° Bound: | -67.08639 | |
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E° Bound: | -64.565639 | |
N° Bound: | 17.892713 | |
S° Bound: | 17.793566 |
Extent Group 1 / Time Frame 1
Time Frame Type: | Range |
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Start: | 2006-03-21 |
End: | 2006-04-02 |
Spatial Information
Spatial Representation
Representations Used
Vector: | Yes |
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Vector Representation 1
Point Object Present?: | Yes |
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Point Object Count: | 4775 |
Access Information
Security Class: | Unclassified |
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Data Access Constraints: |
Please cite any use of this data. |
Data Use Constraints: |
These data were prepared by an agency of the United States Government. Neither the United States Government nor any agency thereof, nor any of their employees, make any warranty, expressed or implied, or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed in this report, or represents that its use would not infringe privately owned rights. Reference therein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise does not necessarily constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency thereof. Any views and opinions of authors expressed herein do not necessarily state or reflect those of the United States Government or any agency thereof. Although all data have been used by NOAA, no warranty, expressed or implied, is made by NOAA as to the accuracy of the data and/or related materials. The act of distribution shall not constitute any such warranty, and no responsibility is assumed by NOAA in the use of these data or related materials. |
Distribution Information
Distribution 1
Download URL: | http://coastalscience.noaa.gov/projects/detail?key=263 |
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Distributor: | |
Description: |
Downloadable Data |
File Type (Deprecated): | ESRI Shapefile |
Distribution Format: | Shapefile |
File Size: | 0.131 |
URLs
URL 1
URL: | http://coastalscience.noaa.gov/projects/detail?key=263 |
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URL Type: |
Online Resource
|
Activity Log
Activity Log 1
Activity Date/Time: | 2015-09-22 |
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Description: |
Date that the source FGDC record was last modified. |
Activity Log 2
Activity Date/Time: | 2017-04-05 |
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Description: |
Converted from FGDC Content Standards for Digital Geospatial Metadata (version FGDC-STD-001-1998) using 'fgdc_to_inport_xml.pl' script. Contact Tyler Christensen (NOS) for details. |
Activity Log 3
Activity Date/Time: | 2017-09-13 |
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Description: |
Partial upload of Spatial Info section only. |
Activity Log 4
Activity Date/Time: | 2017-11-01 |
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Description: |
Replaced entire Lineage section to populate new Source Contribution field. |
Activity Log 5
Activity Date/Time: | 2018-02-08 |
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Description: |
Partial upload of Positional Accuracy fields only. |
Technical Environment
Description: |
Microsoft Windows XP Version 5.1 (Build 2600) Service Pack 2; ESRI ArcCatalog 9.0.0.535 |
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Data Quality
Accuracy: |
See ROV Characterization Methodology Report for NF-06-03. |
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Horizontal Positional Accuracy: |
See ROV Characterization Methodology Report for NF-06-03. |
Vertical Positional Accuracy: |
See ROV Characterization Methodology Report for NF-06-03. |
Completeness Report: |
The ROV video and still photographs were sampled and analyzed only at 30 second intervals- the seafloor area in between is uninterpreted. |
Conceptual Consistency: |
During interpretation and input of habitat values into the initial Excel spreadsheet, a Visual Basic script was used to ensure that all values conformed to logical rules and ranges (i.e. structure types are mutually exclusive, substrate type percentages must sum to 100%).See ROV Characterization Methodology Report for NF-06-03 to learn more about the overall processing methodology. |
Lineage
Sources
NF-06-03 ROV Underwater Still Photography .jpg
Contact Name: | Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Branch |
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Extent Type: | Range |
Extent Start Date/Time: | 2006-03 |
Extent End Date/Time: | 2006-04 |
Source Contribution: |
Original underwater still photography of seafloor along transect. | Source Geospatial Form: remote-sensing image | Type of Source Media: external hard drive |
NF-06-03 ROV Underwater Video .wmv
Contact Name: | Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Branch |
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Extent Type: | Range |
Extent Start Date/Time: | 2006-03 |
Extent End Date/Time: | 2006-04 |
Source Contribution: |
Original underwater video of seafloor along transect.. | Source Geospatial Form: video | Type of Source Media: external hard drive |
Process Steps
Process Step 1
Description: |
Data Acquisition:The NOAA ship Nancy Foster was used to collect underwater video and still photographs of benthic habitats from 3/21/06 to 4/2/06. The 36 ROV transects collected traversed over 70 km. Transect placement was designed for use in both accuracy assesment and ground truthing video (.wmv) and high-resolution digital still photographs (.jpg) were acquired using a downward pointing camera mounted on a Spectrum Phantom S2 Remotely Operated Vehicle (ROV) operated by an experienced team from NURP. Video was collected continuously and still photographs were collected every 30 seconds. The ROV followed pre-determined transect lines and was self-propelled as much as possible, but was towed by the NANCY FOSTER using a 1 inch steel cable when conditions prohibited self-propellation. The camera height off the bottom was kept consistent at approximately 2m and the ROV speed was maintained at 1 meter/second. Most transects were run during daylight hours to guarantee sufficient ambient light levels for visual interpretation, but high powered strobe lights mounted on the ROV were available to supplement ambient light and during occasional night operations. Downward pointing parallel lasers (5cm seperation) were used as scale references. Video and still photographs were transmitted via the ROV cable to shipboard hard drives as they were acquired. An ROV-mounted transducer and an acoustic receiver suspended off the side of the ship were used to determine the ROV's relative position to the ship, while the ROV's absolute geographic position was estimated using this relative position and the shipboard GPS. The positional accuracy was estimated to be within 5 m. |
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Process Date/Time: | 2006-03-01 00:00:00 |
Process Step 2
Description: |
Benthic Habitat Interpretation:The benthic habitat was characterized by visual interpretation of both video images and still photographs by three CCMA interpreters. Interpretations were standardized among interpreters by repeatedly interpreting the same still photos and video until structure classes were the same and percent covers were within 5% of each other. After the initial standardization, interpreters were assignedrandom transects to reduce any possible regional bias.Video was used to interpret broad-scale structure and substrate rugosity, since still photos were incapable of providing this data due to their relatively small and top-down field of view. The still photos were used to estimate the percent cover of finer-scale substrate and biological cover components of the benthic habitat.Structure referred to the broad-scale habitat class within the entire field of view. Based on previous benthic habitat work in the area (Kendall et al., 2001 and the NF-04-06 NANCY FOSTER mission) the structure designation was chosen from either 1) colonized pavement, 2) colonized pavement with sand channels, 3) patch reef, 4) spur and groove, 5) scattered coral and rock in sand, or 6) unconsolidated. Substrate described the visible abiotic components of the benthic habitat. The four substrate classes, considered mutually exclusive and exhaustive were 1) consolidated material, 2) sand, 3) rubble (particles ~ 2-10 cm) and 4) rhodoliths. Substrate was measured to the nearest percent of the visible bottom. An estimate of rugosity was approximated by the vertical range of substrate in the field of view and was classified as either high (> 1m), moderate (< 1m and >0.3m), or low (<0.3m).Biological cover referred to the biotic component of the seafloor and was divided among five mutually-exclusive categories differentiated by their size and shape. These were 1) sponge (Phylum Porifera), 2) gorgonian and black coral (Subclass Octocorallia and subclass Ceriantipatharia), 3) hydrocoral and stony coral (Subclass Hexacorallia), 4) fleshy algae and 5) algae veneer/turf. The sum of all cover categories provided an estimate of total colonization. If a biological cover component could not be unquestionably identified as one of the five cover categories it was only added to the total colonization estimate.Photo stills were viewed in ESRI's ArcMap software (ArcGIS 9) with a superimposed 10 X 10 grid shapefile to aid percent cover estimations. Video was viewed simultaneously on a second monitor using windows media viewer. Interpretation results were entered into an EXCEL spreadsheet using a custom VBA script, with a single record for each sample point (i.e. every still photograph taken at 30 second intervals). These sample points and their associated benthic habitat attributes were then imported in ESRI ArcMap and joined into point shapefiles. |
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Process Date/Time: | 2006-04-01 00:00:00 |
Catalog Details
Catalog Item ID: | 38843 |
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GUID: | gov.noaa.nmfs.inport:38843 |
Metadata Record Created By: | Tyler Christensen |
Metadata Record Created: | 2017-04-05 12:49+0000 |
Metadata Record Last Modified By: | SysAdmin InPortAdmin |
Metadata Record Last Modified: | 2023-10-17 16:12+0000 |
Metadata Record Published: | 2018-02-08 |
Owner Org: | NCCOS |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2018-02-08 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2019-02-08 |