St. John, USVI Rapid Habitat Assessment (RHA) and Monitoring Data (2002 - Present)
Data Set (DS) | National Centers for Coastal Ocean Science (NCCOS)GUID: gov.noaa.nmfs.inport:39200 | Updated: October 17, 2023 | Published / External
Item Identification
Title: | St. John, USVI Rapid Habitat Assessment (RHA) and Monitoring Data (2002 - Present) |
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Short Name: | STJ_RHA_metadata_0707 |
Status: | In Work |
Publication Date: | 2007-03 |
Abstract: |
This fish and benthic composition database is the result of a multifaceted effort described below. The intent of this work is five fold: 1) To spatially characterize and monitor the distribution, abundance, and size of both reef fishes and macro-invertebrates (conch, lobster, Diadema); 2) To relate this information to in-situ data collected on associated benthic composition parameters; 3) To use this information to establish the knowledge base necessary for enacting management decisions in a spatial setting; 4) To establish the efficacy of those management decisions; and 5) To work with the National Coral Reef Monitoring Program to develop data collection standards and easily implemented methodologies for transference to other agencies and to work toward standardizing data collection throughout the US states and territories. Toward this end, the Center for Coastal Monitoring and Assessment's Biogeography Branch (BB) has been conducting research in Puerto Rico and the US Virgin Islands since 2000 and 2001, respectively. It is critical, with recent changes in management at both locations (e.g. implementation of MPAs) as well as proposed changes (e.g. zoning to manage multiple human uses) that action is taken now to accurately describe and characterize the fish/macro-invertebrate populations in these areas. It is also important that BB work closely with the individuals responsible for recommending and implementing these management strategies. Recognizing this, BB has been collaborating with partners at the University of Puerto Rico, National Park Service, US Geological Survey and the Virgin Islands Department of Planning and Natural Resources.To quantify patterns of spatial distribution and make meaningful interpretations, we must first have knowledge of the underlying variables determining species distribution. The basis for this work therefore, is the nearshore benthic habitats maps (less than 100 ft depth) created by NOAA's Biogeography Program in 2001 and NOS' bathymetry models. Using ArcView GIS software, the digitized habitat maps are stratified to select sampling stations. Sites are randomly selected within these strata to ensure coverage of the entire study region and not just a particular reef or seagrass area. At each site, fish, macro-invertebrates, and benthic composition information is then quantified following standardized protocols. By relating the data collected in the field back to the habitat maps and bathymetric models, BB is able to model and map species level and community level information. These protocols are standardized throughout the US Caribbean to enable quantification and comparison of reef fish abundance and distribution trends between locations. Armed with the knowledge of where "hot spots" of species richness and diversity are likely to occur in the seascape, the BB is in a unique position to answer questions about the efficacy of marine zoning strategies (e.g. placement of no fishing, anchoring, or snorkeling locations), and what locations are most suitable for establishing MPAs. Knowledge of the current status of fish/macro-invertebrate communities coupled with longer term monitoring will enable evaluation of management efficacy, thus it is essential to future management actions. |
Purpose: |
1) To spatially characterize and monitor the distribution, abundance, and size of both reef fishes and macro-invertebrates (conch, lobster, Diadema); 2) To relate this information to in-situ data collected on associated benthic composition parameters; 3) To use this information to establish the knowledge base necessary for enacting management decisions in a spatial setting; 4) To establish the efficacy of those management decisions; and 5) To work with the National Coral Reef Monitoring Program to develop data collection standards and easily implemented methodologies for transference to other agencies and to work toward standardizing data collection throughout the US states and territories. |
Notes: |
868 |
Supplemental Information: |
This work is being conducted in collaboration with the National Park Service, US Geological Survey, and the Virgin Islands Department of Planning and Natural Resources. |
Keywords
Theme Keywords
Thesaurus | Keyword |
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ISO 19115 Topic Category |
biota
|
ISO 19115 Topic Category |
environment
|
ISO 19115 Topic Category |
oceans
|
UNCONTROLLED | |
CoRIS Discovery Thesaurus | Numeric Data Sets > Biology |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Aquatic Habitat > Reef Habitat > Description |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Vegetation > Algae > Algal cover |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Vegetation > Algae > Calcareous macroalgae |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Vegetation > Algae > Coralline algae |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Vegetation > Algae > Crustose coralline algae |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Vegetation > Algae > Encrusting macroalgae |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Vegetation > Algae > Fleshy macroalgae |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Vegetation > Algae > Turf algae |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Zoology > Corals |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Zoology > Corals > Reef monitoring and assessment > Baseline studies |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Zoology > Corals > Reef monitoring and assessment > Benthos analysis |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Zoology > Corals > Reef monitoring and assessment > In situ biological |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Zoology > Corals > Reef monitoring and assessment > Monitoring and assessment |
CoRIS Theme Thesaurus | EARTH SCIENCE > Biosphere > Zoology > Corals > Reef monitoring and assessment > Rapid assessment studies |
CoRIS Theme Thesaurus | EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs |
CoRIS Theme Thesaurus | EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral reef ecology > Biodiversity |
CoRIS Theme Thesaurus | EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral reef ecology > Coral cover |
CoRIS Theme Thesaurus | EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral reef ecology > Habitats |
CoRIS Theme Thesaurus | EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral reef ecology > Hard coral cover |
CoRIS Theme Thesaurus | EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral reef ecology > Hard coral cover Live percentage |
CoRIS Theme Thesaurus | EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral reef ecology > Octocoral cover |
CoRIS Theme Thesaurus | EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral reef ecology > Rugosity |
NOS Data Explorer Topic Category | Environmental Monitoring |
Spatial Keywords
Thesaurus | Keyword |
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UNCONTROLLED | |
CoRIS Place Thesaurus | COUNTRY/TERRITORY > United States of America > US Virgin Islands > St. John > St. John (18N064W0011) |
CoRIS Place Thesaurus | OCEAN BASIN > Atlantic Ocean > Caribbean Sea > Virgin Islands > Virgin Islands > St. John > (18N064W0011) |
Physical Location
Organization: | National Centers for Coastal Ocean Science |
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City: | Silver Spring |
State/Province: | MD |
Data Set Information
Data Set Scope Code: | Data Set |
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Maintenance Frequency: | Annually |
Entity Attribute Overview: |
We supply percent cover composition of benthic communities. This information is collected across all nearshore habitat types. In addition, we provide photographs of many of the taxa. For specific information please see the data dictionary available on the database website. |
Entity Attribute Detail Citation: |
NOAA/NCCOS/CCMA/Biogeography Branch |
Distribution Liability: |
These data were prepared by an agency of the United States Government. Neither the United States Government nor any agency thereof, nor any of their employees, make any warranty, expressed or implied, or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed, or represents that its use would not infringe privately owned rights. Reference therein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise does not necessarily constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency thereof. Any views and opinions expressed herein do not necessarily state or reflect those of the United States Government or any agency thereof. Although all data have been used by NOAA, no warranty, expressed or implied, is made by NOAA as to the accuracy of the data and/or related materials. The act of distribution shall not constitute any such warranty, and no responsibility is assumed by NOAA in the use of these data or related materials. |
Data Set Credit: | This is a cooperative effort between NOAA's Biogeography Branch, the National Park Service, and the Virgin Islands Department of Planning and Natural Resources. |
Support Roles
Data Steward
Date Effective From: | 2007-03 |
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Date Effective To: | |
Contact (Position): | NCCOS Scientific Data Coordinator |
Email Address: | NCCOS.data@noaa.gov |
Distributor
Date Effective From: | 2007-03 |
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Date Effective To: | |
Contact (Position): | NCCOS Scientific Data Coordinator |
Email Address: | NCCOS.data@noaa.gov |
Metadata Contact
Date Effective From: | 2007-03 |
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Date Effective To: | |
Contact (Position): | NCCOS Scientific Data Coordinator |
Email Address: | NCCOS.data@noaa.gov |
Point of Contact
Date Effective From: | 2007-03 |
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Date Effective To: | |
Contact (Position): | NCCOS Scientific Data Coordinator |
Email Address: | NCCOS.data@noaa.gov |
Principal Investigator
Date Effective From: | 2007-03 |
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Date Effective To: | |
Contact (Person): | Jeffrey, Chris |
Email Address: | chris.jeffrey@noaa.gov |
Extents
Currentness Reference: | Ground Condition |
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Extent Group 1
Extent Group 1 / Geographic Area 1
W° Bound: | -64.84 | |
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E° Bound: | -64.66 | |
N° Bound: | 18.38 | |
S° Bound: | 18.23 |
Extent Group 1 / Time Frame 1
Time Frame Type: | Continuing |
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Start: | 2002-07 |
Access Information
Security Class: | Unclassified |
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Data Access Constraints: |
None |
Data Use Constraints: |
Please reference NOAA/NCCOS/CCMA/Biogeography Branch when utilizing these data in a report or peer reviewed publication. Additionally, knowledge of how this dataset has been of use and which organizations are utilizing it is of great benefit for ensuring this information continues to meet the needs of the management and research communities.Therefore, it is requested but not mandatory, that any user of this data supply this information to the Program Manager: Kimberly Roberson (email: Kimberly.Roberson@noaa.gov). |
Distribution Information
Distribution 1
Download URL: | http://www8.nos.noaa.gov/bpdmWeb/queryMain.aspx |
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Distributor: | |
Description: |
Downloadable data |
File Type (Deprecated): | tab delimited text file |
Distribution Format: | Text (Tab Delimited) |
URLs
URL 1
URL: | http://www8.nos.noaa.gov/bpdmWeb/queryMain.aspx |
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URL Type: |
Online Resource
|
URL 2
URL: | http://ccma.nos.noaa.gov/ecosystems/coralreef/reef_fish/ |
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URL Type: |
Online Resource
|
Activity Log
Activity Log 1
Activity Date/Time: | 2014-08-07 |
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Description: |
Date that the source FGDC record was last modified. |
Activity Log 2
Activity Date/Time: | 2017-04-05 |
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Description: |
Converted from Content Standard for Digital Geospatial Metadata (version FGDC-STD-001-1998) using 'fgdc_to_inport_xml.pl' script. Contact Tyler Christensen (NOS) for details. |
Data Quality
Completeness Report: |
These data consist of multiple fish community surveys across all nearshore marine habitats around St. John, US Virgin Islands. Sites were randomly selected and stratified across by habitat types using NOAA's benthic habitat maps of St. John, USVI. |
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Conceptual Consistency: |
Not applicable |
Lineage
Process Steps
Process Step 1
Description: |
Rapid Habitat Assessment (RHA) - This habitat survey is modified from a detailed (microscale) habitat assessment used to characterize nearshore habitats and is utilized to characterize areas within and nearby the Virgin Islands Coral Reef National Monument (VICR) boundaries. The VICR consists of two geographic locations: the mid-shelf ridge and Coral Bay. Site selection begins by stratifying NOAA's nearshore benthic habitat maps into predetermined habitat strata and monument boundaries. ArcGIS is then employed to randomly select sites within the hardbottom strata inside and outside the boundaries of the two VICR locations. Using a handheld GPS unit, the boat captain navigates to the previously selected sites. Once on site, two divers are deployed, a fish transect diver and a fish point-count/habitat diver. The habitat measurements are collected by the point-count diver for the area within his/her cylinder and those measurements are assumed representative of the habitat along the transect.Data are collected on the following: 1) Dive logistics - name of the diver, station ID, date, and the start time of the survey. 2) Habitat structure - the dive site is categorized based on the hierarchical classification used to produce the benthic habitat maps. 3) Depth - minimum and maximum depth of the survey area, to provide an estimate of bottom slope. 4) Rugosity (low, medium, or high) - based on the height of the tallest hardbottom structure. 5) Abiotic footprint - an estimate of % cover (within 5%) of hardbottom, sand, and rubble in the 15-m cylinder. The sum of % cover in the abiotic footprint must total 100%. 6) Biotic footprint - an estimate of the % cover (within 5%) of live coral, gorgonians, sponges, macro algae, and uncolonized substrate in the 15-m cylinder. The sum of % cover (including uncolonized substrate) in the biotic footprint must total 100%. 7) Photography - photos to maintain an anecdotal and permanent visual description of the sites that were sampled. Data Caveats: Over time, some changes were made to the stratified random site selection process as follows: 1) Habitat strata initially consisted of hard bottom, sand, and seagrass. Sand and seagrass strata were subsequently combined into one soft bottom strata at all three locations (Puerto Rico, St. Croix, and St. John). This action was taken after the February 2002 mission to Puerto Rico. 2) During the first mission to St. John samples were also stratified by depth (less than or equal to 40 ft or greater than 40 ft). |
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Process Date/Time: | 2002-07-01 00:00:00 |
Catalog Details
Catalog Item ID: | 39200 |
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GUID: | gov.noaa.nmfs.inport:39200 |
Metadata Record Created By: | Tyler Christensen |
Metadata Record Created: | 2017-04-05 12:51+0000 |
Metadata Record Last Modified By: | SysAdmin InPortAdmin |
Metadata Record Last Modified: | 2023-10-17 16:12+0000 |
Metadata Record Published: | 2017-04-17 |
Owner Org: | NCCOS |
Metadata Publication Status: | Published Externally |
Do Not Publish?: | N |
Metadata Last Review Date: | 2017-04-17 |
Metadata Review Frequency: | 1 Year |
Metadata Next Review Date: | 2018-04-17 |