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SEFSC Metadata Library > POPULATION & ECOSYSTEMS MONITORING DIV > Gulf & Caribbean Reef Fish Branch. >

Faunal tissue collections (fishes) for DNA barcoding collected by NOAA National Marine Fisheries Service and Tulane University Biodiversity Research Center from the NOAA ships O...

Data Set (DS)  |  Southeast Fisheries Science Center (SEFSC)
GUID: gov.noaa.nmfs.inport:67655  |  Updated: October 3, 2024  |  Published / External 
Summary
Item Identification
Keywords
Physical Location
Data Set Info
Support Roles
Extents
Access Info
Distribution Info
URLs
Child Items
Catalog Details

Summary

Short Citation
Southeast Fisheries Science Center, 2025: Faunal tissue collections (fishes) for DNA barcoding collected by NOAA National Marine Fisheries Service and Tulane University Biodiversity Research Center from the NOAA ships Oregon II, Pisces and Gordon Gunter in the U.S. Gulf of Mexico from 2010-02-01 to present (NCEI Accession 0255350), https://www.fisheries.noaa.gov/inport/item/67655.
Full Citation Examples

DOI: 10.25921/tjh5-4333

Abstract

Tissue samples for species DNA barcoding and associated whole voucher specimens and their photographs were collected during NOAA National Marine Fisheries Service, Southeast Fisheries Science Center research vessel bottom and midwater trawl surveys in the Gulf of Mexico from (2010-02-01 to present). This dataset represents the tissue samples and voucher specimens archived at the Tulane University Biodiversity Research Center (TUBRI), New Orleans, Louisiana, USA. Tissue samples and associated photographs were collected both during field studies and post-survey in the laboratory. Photographs of the voucher specimens are also included in this dataset. Tissue samples, voucher specimens and voucher specimen photographs (when available) indicated in this dataset are available to researchers for each species listed in the dataset.

Distribution Information

Access Constraints:

Open To Everyone

Controlled Theme Keywords

Alosa alabamae, Anchoa hepsetus, Ancylopsetta ommata, Antigonia capros, Ariomma bondi, Ariopsis felis, Bagre marinus, Balistes capriscus, Bellator militaris, BIOLOGICAL CLASSIFICATION, Bollmannia communis, Bothus robinsi, Brevoortia patronus, Calamus nodosus, Calamus proridens, Caranx crysos, Centropristis ocyurus, Centropristis philadelphica, Chaetodon ocellatus, Chaetodon sedentarius, Chilomycterus schoepfii, Chloroscombrus chrysurus, Citharichthys macrops, Coelorinchus occa, Conodon nobilis, Cyclopsetta chittendeni, Cyclopsetta fimbriata, Cynoscion nothus, Diplectrum bivittatum, Diplectrum formosum, DOC/NOAA/NESDIS/NCEI, DOC/NOAA/NESDIS/NODC, DOC/NOAA/NMFS/SEFSC, Eques lanceolatus, Etropus crossotus, FISH, FISHERIES, Gymnachirus texae, Haemulon aurolineatum, Harengula jaguana, Holacanthus bermudensis, Hoplunnis macrura, Isistius brasiliensis, Isistius plutodus, Lachnolaimus maximus, Lagocephalus laevigatus, Lagodon rhomboides, Leiostomus xanthurus, Lepidopus altifrons, Lepophidium jeannae, Lutjanus campechanus, Lutjanus synagris, Menticirrhus americanus, Menticirrhus littoralis, Micropogonias undulatus, Mullus auratus, Neoepinnula americana, Ogcocephalus declivirostris, Ophidion holbrookii, Opisthonema oglinum, Opsanus beta, Orthopristis chrysoptera, Pagrus pagrus, Parascombrops spinosus, Pareques umbrosus, Parexocoetus brachypterus, Peprilus burti, Peprilus paru, Peristedion miniatum, Polymixia lowei, Pontinus longispinis, Prionotus longispinosus, Prionotus martis, Prionotus paralatus, Prionotus rubio, Prionotus scitulus, Prionotus stearnsi, Prionotus tribulus, Pristipomoides aquilonaris, Pterois, Rachycentron canadum, Rhomboplites aurorubens, Rostroraja, Sardinella aurita, Saurida normani, Scorpaena brasiliensis, Scorpaena calcarata, Selene setapinnis, Seriola dumerili, Serranus atrobranchus, Serranus notospilus, Sphoeroides dorsalis, Sphoeroides parvus, Steindachneria argentea, Stellifer lanceolatus, Stenotomus caprinus, Syacium gunteri, Syacium papillosum, Symphurus diomedeanus, Synagrops bellus, Synodus foetens, Synodus intermedius, Torquigener perlevis, Trichiurus lepturus, Trichopsetta ventralis

Child Items

Type Title
Document 0-email.txt
Document 0255350_lonlat.txt
Document 0255350_map.jpg
Document NCEI Accession 0255350 Journal File
Document NCEI Accession 0255350 Readme File
Document NOAA_TUBRI_Sampling_Protocols_June 2022.docx
Entity Specimen_photos.zip
Entity TUBRI DNA samples_alphabetical_June 2022.xlsx
Document XN65WL-ISO-19115-2.xml

Contact Information

Point of Contact
Henry Bart
hbartjr@tulane.edu
(504) 394-1711
http://people.tubri.org/hank/

Extents

Geographic Area 1

-97.34389° W, -83.52417° E, 30.26611111° N, 26.69666667° S

Time Frame 1
2010-02-01 - 2022-07

Item Identification

Title: Faunal tissue collections (fishes) for DNA barcoding collected by NOAA National Marine Fisheries Service and Tulane University Biodiversity Research Center from the NOAA ships Oregon II, Pisces and Gordon Gunter in the U.S. Gulf of Mexico from 2010-02-01 to present (NCEI Accession 0255350)
Short Name: Fish tissue collections for DNA barcoding collected from Oregon II, Pisces and Gordon Gunter in US GOM from 02/2010-present NCEI Accession 0255350
Status: On Going
Publication Date: 2022-07-30
Abstract:

Tissue samples for species DNA barcoding and associated whole voucher specimens and their photographs were collected during NOAA National Marine Fisheries Service, Southeast Fisheries Science Center research vessel bottom and midwater trawl surveys in the Gulf of Mexico from (2010-02-01 to present). This dataset represents the tissue samples and voucher specimens archived at the Tulane University Biodiversity Research Center (TUBRI), New Orleans, Louisiana, USA. Tissue samples and associated photographs were collected both during field studies and post-survey in the laboratory. Photographs of the voucher specimens are also included in this dataset. Tissue samples, voucher specimens and voucher specimen photographs (when available) indicated in this dataset are available to researchers for each species listed in the dataset.
Purpose:

The primary goal was to conduct midwater and bottom trawling for marine fauna in the U.S. Gulf of Mexico, then sample, photograph and collect marine fauna that were tissue sampled for DNA barcoding.
Other Citation Details:

Cite as: Grace, Mark A.; Bart Jr., Henry L. (2022). Faunal tissue collections (fishes) for DNA barcoding collected by NOAA National Marine Fisheries Service and Tulane University Biodiversity Research Center from the NOAA ships Oregon II, Pisces and Gordon Gunter in the U.S. Gulf of Mexico from 2010-02-01 to present (NCEI Accession 0255350). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/tjh5-4333. Accessed [date]
DOI (Digital Object Identifier): 10.25921/tjh5-4333
DOI Registration Authority: NOAA

Keywords

Theme Keywords

Thesaurus Keyword
Global Change Master Directory (GCMD) Data Center Keywords
DOC/NOAA/NESDIS/NCEI > National Centers for Environmental Information, NESDIS, NOAA, U.S. Department of Commerce
Global Change Master Directory (GCMD) Data Center Keywords
DOC/NOAA/NESDIS/NODC > National Oceanographic Data Center, NESDIS, NOAA, U.S. Department of Commerce
Global Change Master Directory (GCMD) Data Center Keywords
DOC/NOAA/NMFS/SEFSC > Southeast Fisheries Science Center, National Marine Fisheries Service, NOAA, U.S. Department of Commerce
Global Change Master Directory (GCMD) Science Keywords
EARTH SCIENCE > AGRICULTURE > AGRICULTURAL AQUATIC SCIENCES > FISHERIES
Global Change Master Directory (GCMD) Science Keywords
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION
Global Change Master Directory (GCMD) Science Keywords
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > FISH
World Register of Marine Species (WoRMS)
Alosa alabamae View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Anchoa hepsetus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Ancylopsetta ommata View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Antigonia capros View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Ariomma bondi View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Ariopsis felis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Bagre marinus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Balistes capriscus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Bellator militaris View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Bollmannia communis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Bothus robinsi View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Brevoortia patronus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Calamus nodosus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Calamus proridens View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Caranx crysos View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Centropristis ocyurus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Centropristis philadelphica View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Chaetodon ocellatus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Chaetodon sedentarius View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Chilomycterus schoepfii View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Chloroscombrus chrysurus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Citharichthys macrops View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Coelorinchus occa View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Conodon nobilis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Cyclopsetta chittendeni View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Cyclopsetta fimbriata View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Cynoscion nothus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Diplectrum bivittatum View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Diplectrum formosum View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Eques lanceolatus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Etropus crossotus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Gymnachirus texae View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Haemulon aurolineatum View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Harengula jaguana View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Holacanthus bermudensis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Hoplunnis macrura View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Isistius brasiliensis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Isistius plutodus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Lachnolaimus maximus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Lagocephalus laevigatus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Lagodon rhomboides View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Leiostomus xanthurus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Lepidopus altifrons View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Lepophidium jeannae View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Lutjanus campechanus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Lutjanus synagris View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Menticirrhus americanus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Menticirrhus littoralis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Micropogonias undulatus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Mullus auratus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Neoepinnula americana View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Ogcocephalus declivirostris View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Ophidion holbrookii View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Opisthonema oglinum View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Opsanus beta View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Orthopristis chrysoptera View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Pagrus pagrus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Parascombrops spinosus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Pareques umbrosus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Parexocoetus brachypterus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Peprilus burti View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Peprilus paru View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Peristedion miniatum View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Polymixia lowei View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Pontinus longispinis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Prionotus longispinosus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Prionotus martis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Prionotus paralatus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Prionotus rubio View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Prionotus scitulus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Prionotus stearnsi View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Prionotus tribulus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Pristipomoides aquilonaris View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Pterois View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Rachycentron canadum View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Rhomboplites aurorubens View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Rostroraja View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Sardinella aurita View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Saurida normani View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Scorpaena brasiliensis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Scorpaena calcarata View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Selene setapinnis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Seriola dumerili View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Serranus atrobranchus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Serranus notospilus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Sphoeroides dorsalis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Sphoeroides parvus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Steindachneria argentea View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Stellifer lanceolatus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Stenotomus caprinus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Syacium gunteri View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Syacium papillosum View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Symphurus diomedeanus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Synagrops bellus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Synodus foetens View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Synodus intermedius View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Torquigener perlevis View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Trichiurus lepturus View WoRMS Aphia Record
World Register of Marine Species (WoRMS)
Trichopsetta ventralis View WoRMS Aphia Record
UNCONTROLLED
NCEI ACCESSION NUMBER 0255350
NCEI ACCESSION NUMBER 255350
NMFS Marine Mammal Permit 779-1633
NODC COLLECTING INSTITUTION NAMES THESAURUS US DOC; NOAA; NMFS; Southeast Fisheries Science Center
NODC DATA TYPES THESAURUS FISH
NODC DATA TYPES THESAURUS FISH SPECIES
NODC DATA TYPES THESAURUS FISHERY SURVEY
NODC DATA TYPES THESAURUS MARINE SPECIES INVENTORY
NODC DATA TYPES THESAURUS SPECIES IDENTIFICATION - PRESERVATION
NODC OBSERVATION TYPES THESAURUS fish examination
NODC OBSERVATION TYPES THESAURUS in situ
NODC OBSERVATION TYPES THESAURUS visual observation
NODC PROJECT NAMES THESAURUS Gulf of Mexico Marine Assessment Program for Protected Species (GOMMAPPS)
NODC PROJECT NAMES THESAURUS Southeast Area Monitoring and Assessment Program (SEAMAP)
NODC SEA AREA NAMES THESAURUS Coastal Waters of Texas
NODC SUBMITTING INSTITUTION NAMES THESAURUS Tulane University; Department of Ecology and Evolutionary Biology

Spatial Keywords

Thesaurus Keyword
Global Change Master Directory (GCMD) Location Keywords
OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > GULF OF MEXICO
UNCONTROLLED
NODC SEA AREA NAMES THESAURUS Gulf of Mexico

Instrument Keywords

Thesaurus Keyword
Global Change Master Directory (GCMD) Instrument Keywords
TRAWL
UNCONTROLLED
NODC INSTRUMENT TYPES THESAURUS Line Transect Sampling
NODC INSTRUMENT TYPES THESAURUS photograph
NODC INSTRUMENT TYPES THESAURUS scale
NODC INSTRUMENT TYPES THESAURUS trawl

Platform Keywords

Thesaurus Keyword
Global Change Master Directory (GCMD) Platform Keywords
Oregon II > NOAA Ship Oregon II
Global Change Master Directory (GCMD) Platform Keywords
Ships
UNCONTROLLED
NODC PLATFORM NAMES THESAURUS NOAA Ship Gordon Gunter
NODC PLATFORM NAMES THESAURUS NOAA Ship Oregon II
NODC PLATFORM NAMES THESAURUS NOAA Ship Pisces

Physical Location

Organization: National Centers for Environmental Information - Silver Spring, Maryland
City: Silver Spring
State/Province: MD

Data Set Information

Data Set Scope Code: Data Set
Maintenance Frequency: As Needed

Support Roles

Author

CC ID: 1180728
Date Effective From: 2022
Date Effective To:
Contact (Person): Bart, Henry
Address: 3705 Main St., Building A-3
Belle Chasse, , LA 70037
Email Address: hbartjr@tulane.edu
Phone: (504) 394-1711
Mobile: (504) 862-8283
URL: http://people.tubri.org/hank/

Data Steward

CC ID: 1267606
Date Effective From: 2022
Date Effective To:
Contact (Person): Bart, Henry
Address: 3705 Main St., Building A-3
Belle Chasse, , LA 70037
Email Address: hbartjr@tulane.edu
Phone: (504) 394-1711
Mobile: (504) 862-8283
URL: http://people.tubri.org/hank/

Distributor

CC ID: 1180727
Date Effective From: 2022
Date Effective To:
Contact (Organization): NOAA National Centers for Environmental Information (NCEI)
Email Address: ncei.info@noaa.gov
URL: NCEI Contact Information

Point of Contact

CC ID: 1267605
Date Effective From: 2022
Date Effective To:
Contact (Person): Bart, Henry
Address: 3705 Main St., Building A-3
Belle Chasse, , LA 70037
Email Address: hbartjr@tulane.edu
Phone: (504) 394-1711
Mobile: (504) 862-8283
URL: http://people.tubri.org/hank/
View Historical Support Roles

Extents

Currentness Reference: Publication Date

Extent Group 1

Extent Description:

US Gulf of Mexico Waters

Extent Group 1 / Geographic Area 1

CC ID: 1180783
W° Bound: -97.34389
E° Bound: -83.52417
N° Bound: 30.26611111
S° Bound: 26.69666667

Extent Group 1 / Time Frame 1

CC ID: 1180784
Time Frame Type: Range
Start: 2010-02-01
End: 2022-07

Access Information

Security Class: Unclassified
Data Access Constraints:

Open To Everyone

Distribution Information

Distribution 1

CC ID: 1180726
Start Date: 2022
End Date: Present
Download URL: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/accession/download/255350
Distributor: NOAA National Centers for Environmental Information (NCEI) (2022 - Present)
File Name: 255350.1.1.tar.gz
File Type (Deprecated): NCEI Archived Data Accession
File Size: (671.388 MB
Compression: GTAR
Review Status: Chked Viruses Inapp Content

URLs

URL 1

CC ID: 1180778
URL: http://www.tubri.org/
Name: Tulane University Biodiversity Research Institute website
URL Type:
Online Resource
File Resource Format: html

URL 2

CC ID: 1180779
URL: http://seamap.org/
Name: Southeast Area Monitoring and Assessment Program website
URL Type:
Online Resource
File Resource Format: html

URL 3

CC ID: 1180780
URL: https://www.boem.gov/gommapps
Name: Gulf of Mexico Marine Assessment Program for Protected Species (GoMMAPPS)
URL Type:
Online Resource
File Resource Format: html

URL 4

CC ID: 1180829
URL: https://doi.org/10.25921/tjh5-4333
Name: Landing Page NCEI Accession 0255350
URL Type:
Online Resource
File Resource Format: html
Description:

Faunal tissue collections (fishes) for DNA barcoding collected by NOAA National Marine Fisheries Service and Tulane University Biodiversity Research Center from the NOAA ships Oregon II, Pisces and Gordon Gunter in the U.S. Gulf of Mexico from 2010-02-01 to present (NCEI Accession 0255350)

Catalog Details

Catalog Item ID: 67655
GUID: gov.noaa.nmfs.inport:67655
Metadata Record Created By: Lee M Weinberger
Metadata Record Created: 2022-08-12 20:24+0000
Metadata Record Last Modified By: SysAdmin InPortAdmin
Metadata Record Last Modified: 2024-10-03 18:16+0000
Metadata Record Published: 2022-08-14
Owner Org: SEFSC
Metadata Publication Status: Published Externally
Do Not Publish?: N
Metadata Review Frequency: 1 Year